* update the wiki repository remote origin #12050

* wikiRemoteURL is under repo_module

* export WikiRemoteURL func

* remove redundant space and empty line

Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>

This fixes an issue I noticed with #10803: when you create a repo with a non-master default branch, gitea doesn't change the remote ref HEAD, so it still points at refs/heads/master. As a result, cloning my repos gives me error messages and doesn't check out the desired default branch, so I need to manually check it out after cloning.

* Global default branch setting

* add to app.ini example per @silverwind

* update per @lunny

Co-authored-by: John Olheiser <john.olheiser@gmail.com>

* Handle more pathological branch and tag names

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Fix failing test

Signed-off-by: Andrew Thornton <art27@cantab.net>

Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* Fix visibility of forked public repos from private orgs

* update forks visibility when org visibility is changed

Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: zeripath <art27@cantab.net>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* [FEATURE] [API] Add Endpoint for Branch Creation

Issue: https://github.com/go-gitea/gitea/issues/11376

This commit introduces an API endpoint for branch creation.

The added route is POST /repos/{owner}/{repo}/branches.
A JSON with the name of the new branch and the name of the old branch is
required as parameters.

Signed-off-by: Terence Le Huu Phuong <terence@qwasar.io>

* Put all the logic into CreateBranch and removed CreateRepoBranch

* - Added the error ErrBranchDoesNotExist in error.go
- Made the CreateNewBranch function return an errBranchDoesNotExist error
when the OldBranch does not exist
- Made the CreateBranch API function checks that the repository is not
empty and that branch exists.

* - Added a resetFixtures helper function in integration_test.go to
fine-tune test env resetting
- Added api test for CreateBranch
- Used resetFixture instead of the more general prepareTestEnv in the
repo_branch_test CreateBranch tests

* Moved the resetFixtures call inside the loop for APICreateBranch function

* Put the prepareTestEnv back in repo_branch_test

* fix import order/sort api branch test

Co-authored-by: zeripath <art27@cantab.net>

Fix #10760

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Refactor Cron and merge dashboard tasks

* Merge Cron and Dashboard tasks
* Make every cron task report a system notice on completion
* Refactor the creation of these tasks
* Ensure that execution counts of tasks is correct
* Allow cron tasks to be started from the cron page

* golangci-lint fixes

* Enforce that only one task with the same name can be registered

Signed-off-by: Andrew Thornton <art27@cantab.net>

* fix name check

Signed-off-by: Andrew Thornton <art27@cantab.net>

* as per @guillep2k

* as per @lafriks

Signed-off-by: Andrew Thornton <art27@cantab.net>

* Add git.CommandContext variants

Signed-off-by: Andrew Thornton <art27@cantab.net>

Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* Update header.tmpl

* Update _repository.less

* Update pull.go

* Update indexer.go

* Update pull.go

* Update pull.go

* Update indexer.go

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

* fix forked repo doesn't have language stat

Thanks the advice from lunny and 6543.

* fix forked repo doesn't have language stat

Modified as suggested by 6543.

* fix forked repo doesn't have language stat

simplify the function.

* fix forked repo doesn't have language stat

update the indexer after the loop

Co-authored-by: techknowlogick <techknowlogick@gitea.io>
Co-authored-by: Lauris BH <lauris@nix.lv>

Co-Authored-By: 6543 <6543@obermui.de>
Co-authored-by: techknowlogick <techknowlogick@gitea.io>

* Add `gitea doctor --list` flag to list the checks that will be run, including those by default
* Add `gitea doctor --run` to run specific checks
* Add `gitea doctor --all` to run all checks
* Add db version checker
* Add non-default recalculate merge bases check/fixer to doctor
* Add hook checker (Fix #9878) and ensure hooks are executable (Fix #6319)
* Fix authorized_keys checker - slight change of functionality here because parsing the command is fragile and we should just check if the authorized_keys file is essentially the same as what gitea would produce. (This is still not perfect as order matters - we should probably just md5sum the two files.)
* Add SCRIPT_TYPE check (Fix #10977)
* Add `gitea doctor --fix` to attempt to fix what is possible to easily fix
* Add `gitea doctor --log-file` to set the log-file, be it a file, stdout or to switch off completely. (Fixes previously undetected bug with certain xorm logging configurations - see @6543 comment.)

Signed-off-by: Andrew Thornton <art27@cantab.net>

* test -x is not enough https://stackoverflow.com/a/39489087

* Add organization wide labels

Implement organization wide labels similar to organization wide
webhooks. This lets you create individual labels for organizations that can be used
for all repos under that organization (so being able to reuse the same
label across multiple repos).

This makes it possible for small organizations with many repos to use
labels effectively.

Fixes #7406

* Add migration

* remove comments

* fix tests

* Update options/locale/locale_en-US.ini

Removed unused translation string

* show org labels in issue search label filter

* Use more clear var name

* rename migration after merge from master

* comment typo

* update migration again after rebase with master

* check for orgID <=0 per guillep2k review

* fmt

* Apply suggestions from code review

Co-Authored-By: guillep2k <18600385+guillep2k@users.noreply.github.com>

* remove unused code

* Make sure RepoID is 0 when searching orgID per code review

* more changes/code review requests

* More descriptive translation var per code review

* func description/delete comment when issue label deleted instead of hiding it

* remove comment

* only use issues in that repo when calculating number of open issues for org label on repo label page

* Add integration test for IssuesSearch API with labels

* remove unused function

* Update models/issue_label.go

Co-Authored-By: guillep2k <18600385+guillep2k@users.noreply.github.com>

* Use subquery in GetLabelIDsInReposByNames

* Fix tests to use correct orgID

* fix more tests

* IssuesSearch api now uses new BuildLabelNamesIssueIDsCondition. Add a few more tests as well

* update comment for clarity

* Revert previous code change now that we can use the new BuildLabelNamesIssueIDsCondition

* Don't sort repos by date in IssuesSearch API

After much debugging I've found a strange issue where in some cases MySQL will return a different result than other enigines if a query is sorted by a null collumn. For example with our integration test data where we don't set updated_unix in repository fixtures:

SELECT `id`, `owner_id`, `owner_name`, `lower_name`, `name`, `description`, `website`, `original_service_type`, `original_url`, `default_branch`, `num_watches`, `num_stars`, `num_forks`, `num_issues`, `num_closed_issues`, `num_pulls`, `num_closed_pulls`, `num_milestones`, `num_closed_milestones`, `is_private`, `is_empty`, `is_archived`, `is_mirror`, `status`, `is_fork`, `fork_id`, `is_template`, `template_id`, `size`, `is_fsck_enabled`, `close_issues_via_commit_in_any_branch`, `topics`, `avatar`, `created_unix`, `updated_unix` FROM `repository` ORDER BY updated_unix DESC LIMIT 15 OFFSET 45

Returns different results for MySQL than other engines. However, the similar query:

SELECT `id`, `owner_id`, `owner_name`, `lower_name`, `name`, `description`, `website`, `original_service_type`, `original_url`, `default_branch`, `num_watches`, `num_stars`, `num_forks`, `num_issues`, `num_closed_issues`, `num_pulls`, `num_closed_pulls`, `num_milestones`, `num_closed_milestones`, `is_private`, `is_empty`, `is_archived`, `is_mirror`, `status`, `is_fork`, `fork_id`, `is_template`, `template_id`, `size`, `is_fsck_enabled`, `close_issues_via_commit_in_any_branch`, `topics`, `avatar`, `created_unix`, `updated_unix` FROM `repository` ORDER BY updated_unix DESC LIMIT 15 OFFSET 30

Returns the same results.

This causes integration tests to fail on MySQL in certain cases but would never show up in a real installation. Since this API call always returns issues based on the optionally provided repo_priority_id or the issueID itself, there is no change to results by changing the repo sorting method used to get ids earlier in the function.

* linter is back!

* code review

* remove now unused option

* Fix newline at end of files

* more unused code

* update to master

* check for matching ids before query

* Update models/issue_label.go

Co-Authored-By: 6543 <6543@obermui.de>

* Update models/issue_label.go

* update comments

* Update routers/org/setting.go

Co-authored-by: Lauris BH <lauris@nix.lv>
Co-authored-by: guillep2k <18600385+guillep2k@users.noreply.github.com>
Co-authored-by: 6543 <6543@obermui.de>

* Handle push rejections and push out-of-date in branch creation and
file upload.
* Remove the duplicated sanitize from services/pull/merge
* Move the errors Err(Merge)PushOutOfDate and ErrPushRejected to
modules/git
* Handle errors better in the upload file dialogs

Fix #10460

Signed-off-by: Andrew Thornton <art27@cantab.net>
Co-authored-by: guillep2k <18600385+guillep2k@users.noreply.github.com>

speed up page generation by making avatar lookup occur at the browser
not at page generation

* Protect against evil email address ".."

* hash the complete email address

Signed-off-by: Andrew Thornton <art27@cantab.net>

Co-Authored-By: Lauris BH <lauris@nix.lv>

* Option to set default branch at repository creation
* Handle template repos with non-default master branch
* Add DefaultBranch handling on creation to API

Fix #9542

Signed-off-by: Andrew Thornton <art27@cantab.net>

* update and use labelColorPattern

* add TestCases

* fix lint

* # optional for templates

* fix typo

* some more

* fix lint of **master**

* Move PushUpdateAddDeleteTags to repository module from models

* Fix deadlock on sqlite

* Super expansion
* Explain which features are in 1.11 vs 1.12
* Move imports

Signed-off-by: jolheiser <john.olheiser@gmail.com>

* paginate results

* fixed deadlock

* prevented breaking change

* updated swagger

* go fmt

* fixed find topic

* go mod tidy

* go mod vendor with go1.13.5

* fixed repo find topics

* fixed unit test

* added Limit method to Engine struct; use engine variable when provided; fixed gitignore

* use ItemsPerPage for default pagesize; fix GetWatchers, getOrgUsersByOrgID and GetStargazers; fix GetAllCommits headers; reverted some changed behaviors

* set Page value on Home route

* improved memory allocations

* fixed response headers

* removed logfiles

* fixed import order

* import order

* improved swagger

* added function to get models.ListOptions from context

* removed pagesize diff on unit test

* fixed imports

* removed unnecessary struct field

* fixed go fmt

* scoped PR

* code improvements

* code improvements

* go mod tidy

* fixed import order

* fixed commit statuses session

* fixed files headers

* fixed headers; added pagination for notifications

* go mod tidy

* go fmt

* removed Private from user search options; added setting.UI.IssuePagingNum as default valeu on repo's issues list

* Apply suggestions from code review

Co-Authored-By: 6543 <6543@obermui.de>
Co-Authored-By: zeripath <art27@cantab.net>

* fixed build error

* CI.restart()

* fixed merge conflicts resolve

* fixed conflicts resolve

* improved FindTrackedTimesOptions.ToOptions() method

* added backwards compatibility on ListReleases request; fixed issue tracked time ToSession

* fixed build error; fixed swagger template

* fixed swagger template

* fixed ListReleases backwards compatibility

* added page to user search route

Co-authored-by: techknowlogick <matti@mdranta.net>
Co-authored-by: 6543 <6543@obermui.de>
Co-authored-by: zeripath <art27@cantab.net>

Move more general repository functions out of models/repo.go

* Add require signed commit for protected branch

* Fix fmt

* Make editor show if they will be signed

* bugfix

* Add basic merge check and better information for CRUD

* linting comment

* Add descriptors to merge signing

* Slight refactor

* Slight improvement to appearances

* Handle Merge API

* manage CRUD API

* Move error to error.go

* Remove fix to delete.go

* prep for merge

* need to tolerate \r\n in message

* check protected branch before trying to load it

* Apply suggestions from code review

Co-Authored-By: guillep2k <18600385+guillep2k@users.noreply.github.com>

* fix commit-reader

Co-authored-by: guillep2k <18600385+guillep2k@users.noreply.github.com>

* Move newbranch to standalone package

* move branch functions to modules to avoid dependencies cycles

* fix tests

* fix lint

* fix lint

* Move create/fork repository from models to modules/repository

* fix wrong reference

* fix test

* fix test

* fix lint

* Fix DBContext

* remove duplicated TestMain

* fix lint

* fix conflicts

* Move push commits from models to modules/repository

* fix test

* fix test

* fix test

* fix test

* fix test

Co-authored-by: zeripath <art27@cantab.net>

* make notifyWatchers work on multiple actions

* more efficient multiple notifyWatchers

* Make CommitRepoAction take advantage of multiple actions

* Batch post and pre-receive results

* Set batch to 30

* Auto adjust timeout & add logging

* adjust processing message

* Add some messages to pre-receive

* Make any non-200 status code from pre-receive an error

* Add missing hookPrintResults

* Remove shortcut for single action

* mistaken merge fix

* oops

* Move master branch to the front

* If repo was empty and the master branch is pushed ensure that that is set as the default branch

* fixup

* fixup

* Missed HookOptions in setdefaultbranch

* Batch PushUpdateAddTag and PushUpdateDelTag

Co-authored-by: Lunny Xiao <xiaolunwen@gmail.com>

* Move some repository methods from models to modules/repository

* fix test